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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901272.1_cds_XP_016451291.1_45661
CDS Infomation

[gene=LOC107776000] [db_xref=GeneID:107776000] [protein=phosphoenolpyruvate carboxykinase [ATP]-like] [protein_id=XP_016451291.1] [location=join(59413..59645,59885..60057,60291..60444,60735..60819,61065..61165,61316..61614,61884..62057,62150..62215,62326..62504,62595..62764,62859..63027,63149..63292)] [gbkey=CDS]
Sequence

ATGGCATCCCATGGCAATGGGCTGGCGAAGATCGAGACACAGAAGATGAAAGAAGATAAG
ATCATATGCCACGATGATAGCGCAGTTCCAGTGACAGCTCAGACAGAGGACGAGTTGCAT
TCCCTTCAGAAGAAGAAATCTGGACCCAATACCCCTATCAAGGATATTCAGAGTGCCTTT
GGCATCCCCACTACTGAAGTTGAGCGACAGAAACAACAACTCCAATCCATCAGTGCATCA
TTGGCATCATTGACAAGAGAGACGGGACCAAAGGTTGTGAAAGGAGACCCTAGGGTGGAG
ACGCCCAAGTTGGTGCAAGCCTCTCAGCCTAAACACACTGCAGCACCTAACATTACTGAT
AGTGCTCTCAAGTTCACTCACATCCTCTATAATCTTTCCCCTGCTGAGCTGTATGAGCAA
GCAATCCAGAATGAAAAGGGCTCATTCATCACATCAAGTGGTGCTTTGGCCACACTTTCT
GGAGCCAAAACTGGCCGATCCCCAAGAGACAAGCGCGTTGTTAAGGATGAAACCACTGCA
AATGAACTTTGGTGGGGAAAGGGTTCACCTAACATTGAAATGGACGAACAGACTTTCTTA
ATCAACAGAGAAAGAGCCGTTGATTATCTATGCTCTTTGGAGAAGGTTTTCGTGAATGAT
CAGTTTCTCAACTGGGATCCAAACAATCGTATCAAAGTTAGAATTGTATCTGCCAGAGCC
TATCACTCCTTGTTCATGCACAACATGTGTATCCGACCCACTCCTGAAGAGCTAGAGAAT
TTTGGTACTCCGGACTTCACAATATACAATGCTGGGAAATTCCCATGTAACCGTTACACT
CACTATATGACTTCCTCCACTAGCATAGACATCAATCTTGCTAGGAGAGAAATGGTGATC
CTTGGCACACAGTATGCTGGCGAAATGAAGAAAGGTCTCTTCAGTCTAATGCACTATTTA
ATGCCTAAGCGCCAGATTCTCTCTCTGCATTCTGGCTGCAATATGGGAAAAGAAGGAGAT
GTAGCCCTCTTCTTTGGATTATCAGGAACTGGGAAGACTACATTGTCTACAGACCATAAT
AGGTACCTAATCGGAGATGATGAACATTGTTGGAGTGATCATGGTGTTTCGAACATTGAG
GGTGGTTGTTATGCAAAATGCATTGACTTGTCAAGGGAGAAGGAGCCTGATATTTGGAAT
GCCATCAAGTTTGGCACCGTGTTGGAAAATGTGGTTTTTGAAGAGCGTACTCGACAAGTG
GACTATGCGGATAAATCAGTAACAGAGAACACAAGGGCAGCATATCCAATTGAATACATC
CCCAATGCTAAAATACCATGTGTTGGTCCTCATCCTAAAAATGTCATTCTCCTAGCCTGT
GACGCGTTTGGTGTGCTCCCTCCAGTCAGCAAGTTGAACTTAGCACAAACAATGTACCAC
TTTATTAGTGGCTACACAGCTTTGGTGGCAGGAACCGAGGATGGAATTAAGGAGCCTACA
GCAACATTTTCAGCATGTTTCGGTGCAGCATTTATAATGCTTCATCCGACAAAATACGCA
GCAATGCTAGCTGAGAAAATGCAGAAACATGGAGCTACGGGATGGCTTGTGAACACTGGA
TGGTCAGGTGGAAGCTATGGATCAGGTGGTCGTATTAAGTTAGCATACACAAGAAAGATC
ATTGATGCTATTCACTCAGGAGAACTTTTGGAAGCAAATTACACGAAAACTGAGGTGTTT
GGGCTTGAAATCCCAACTGAACTTGAGGGAGTTCCTTCACAGATTCTGGATCCAGCGAAC
ACTTGGCCGGACAAGAATGCGTACAAGGAAACTCTCATGAAGCTGGGAGGTCTGTTTAGG
AAGAACTTTGAGGTGTTCGCAAACTACAAGATTGGAGCTGATAACAATCTGACTGAGGAG
ATACTGGCTGCAGGTCCCAACTTCTGA

Peptide Sequence

PEP ID

XP_016451291.1
PEP Infomation

PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Nicotiana tabacum]
Sequence

MASHGNGLAKIETQKMKEDKIICHDDSAVPVTAQTEDELHSLQKKKSGPNTPIKDIQSAF
GIPTTEVERQKQQLQSISASLASLTRETGPKVVKGDPRVETPKLVQASQPKHTAAPNITD
SALKFTHILYNLSPAELYEQAIQNEKGSFITSSGALATLSGAKTGRSPRDKRVVKDETTA
NELWWGKGSPNIEMDEQTFLINRERAVDYLCSLEKVFVNDQFLNWDPNNRIKVRIVSARA
YHSLFMHNMCIRPTPEELENFGTPDFTIYNAGKFPCNRYTHYMTSSTSIDINLARREMVI
LGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHN
RYLIGDDEHCWSDHGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENVVFEERTRQV
DYADKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYH
FISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTG
WSGGSYGSGGRIKLAYTRKIIDAIHSGELLEANYTKTEVFGLEIPTELEGVPSQILDPAN
TWPDKNAYKETLMKLGGLFRKNFEVFANYKIGADNNLTEEILAAGPNF

Transcript Sequence

Gene sequence data has not been registered.